OK, more updates 2017
Well, the last post was about updates, but it was more about 2016 than 2017. Here a couple graphs for your delight. One before filtering, the other after, with the counts of prokaryotic genomes in each NCBI category as of July 2017.
The four categories are: Complete, Chromosome, Scaffold, and Contigs. My filtering used to include redundant TaxIDs, but I learned that TaxIDs wasn’t a good idea. Now I filter only by strain, substrain, etc, as provided by the NCBI list of features. Not perfect, but I seem to keep most genomes.
Enjoy.
-
- Before filtering redundant names
-
- After filtering redundant names
CIHR
CONACyT
NSERC
SHARCNET
University of Waterloo
Wilfrid Laurier University
Lab of Computational conSequences 
You must be logged in to post a comment.